There's an issue with the charging systems - the voltage regulator likes to regulate at 16V, not 14V. This boils out the water fairly rapidly.
Do you have a kickstart machine? Both of mine are KS only. I used a used Milwaukee Tools 18V Lithium battery to circumvent this issue, but a NiCad or NiMh would do the trick as well. Any 18V battery should work, it just needs 2-3 AH capacity.
I used spade lugs taped into place, with a little contact grease to preclude corrosion. The tool batteries are armored anyway, but I added some bubble wrap for cushion & tucked the whole mess away in the left hand tool box.
Now when the reg/rec parks at 16V, the 18V battery just doesn't care, it just says "well, come on..." and takes a partial charge. There's plenty of capacity for headlights, turn signals, horn & tail lights at idle for 5-10 minutes. Cooking your battery becomes a thing of the past. and, it's a bunch lighter besides being more vibration proof. Another positive is eliminating exposed terminals. I actually dropped a small tool on the (+) terminal of my old battery and shorted to frame ground. LUCKILY I had a screwdriver within reach to flip the tool free with. A coin or wad of keys getting in there while riding would create an ugly situation.
The stock reg/rec works great - at 16V - and adapting the battery voltage to it is way easier that re-engineering the reg/rec circuit. Putting a small battery in the toolbox means you get to toss the old clunky battery box, opens up the middle of the machine and eases maintenance & cleaning chores.