Yes...
The lever can be moved up and down for clearance, it fits.. Here is a picture of the pipe in question on my 95 before the rh shift conversion. On the 4spd and 5spd the shifter sist in the same position (footpegs are the same). No real clearance issues...
I plan on putting this pipe on my 07 (it is a rh shift 5spd) when I fireball it.. Just another project I really don't have time for.....